Table 2 Execution times (min.) for processing the synthetic dataset (1% mutation rate)
From: A new parallel pipeline for DNA methylation analysis of long reads datasets
Length (nt) | HPG-Methyl2 | HPG-Methyl | Bismark |
|---|---|---|---|
75 | 1.288 | 1.366 | 62.579 |
150 | 1.550 | 1.95 | 106.173 |
400 | 5.041 | 10.85 | 248.107 |
800 | 11.260 | 50.6 | 1246,89 |
1600 | 34.440 | 996.567 | – |
3200 | 164.593 | 7733.38 | – |