Table 5 Signatures detected in top 20 ranked features (Zebrafish)

1

IG

TxExLenAvg,

ph8m, py8m,

AAT, ACG,

KOZAK,

0.39 (0.90)

TxLen,

py8mn

ATT, CCG,

OrfProp

TxNex

CG, CGA,

CGC, CGG,

FickScore,

GAG, GG,

GGA, GGC,

TA, TAA,

TCG, TGG,

TT, TTG

2

RFS

TxExLenAvg,

ph8m, py8m,

FickScore

KOZAK,

DNA.DNA,

0.32 (0.87)

TxLen,

py8mn

OrfProp

DNA.hAT,

TxNex

DNA.hAT.Ac,

DNA.hAT.Charlie,

DNA.hAT.Tip100,

DNA.Kolobok,

DNA.PiggyBac,

DNA.TcMar.Tc1,

LINE.L2, SINE.5S,

SINE.V

3

LR, EN,

TxExLenAvg,

ph8m, py8m,

AA, AAT, ACA,

KOZAK,

0.41 (0.90)

EFmn

TxLen,

py8mn

ACT, AGT,

OrfProp

TxNex

CAT, CGC,

CTA, CTC,

FickScore,

GAG, GC,

GCC, GGA,

TAA, TAC,

TCC, TGA,

TGG, TTG

4

WT

TxNex

AAC, AAT,

0.36 (0.89)

ACA, ACC,

ACG, AG,

AGC, AGG,

AT, CAG,

CCA, CCG,

CG, CGA,

CG, CGA,

GG, TC