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Table 1 Distribution of the manually checked peptides for the training and testing datasets (Fraction 5 and Fraction 6 respectively; based on Additional file 1: Table S1)

From: EnCOUNTer: a parsing tool to uncover the mature N-terminus of organelle-targeted proteins in complex samples

Starting position Classification Hits for Fraction 5 Hits for Fraction 6
Position 1 and 2 True Protein N-termini 189 261
False Protein N-termini 0 1
Position > 2 True downstream N-termini 202 232
Ambiguous downstream N-termini 63 61
False downstream N-termini 329 451