EnCOUNTer: a parsing tool to uncover the mature N-terminus of organelle-targeted proteins in complex samples

BMC Bioinformatics

Table 1 Distribution of the manually checked peptides for the training and testing datasets (Fraction 5 and Fraction 6 respectively; based on Additional file 1: Table S1)

Starting position	Classification	Hits for Fraction 5	Hits for Fraction 6
Position 1 and 2	True Protein N-termini	189	261
Position 1 and 2	False Protein N-termini	0	1
Position > 2	True downstream N-termini	202	232
	Ambiguous downstream N-termini	63	61
	False downstream N-termini	329	451

ISSN: 1471-2105