Skip to main content

Table 3 Proteins with up-regulated expression profiles (PUR proteins)

From: The autophagy interaction network of the aging model Podospora anserina

Protein

Alias

Module no.

Pearson correlation

Ratio

Pa_0_1500

PaATG13

2

0.87

1.74

Pa_1_10350

PaMAN1

2

0.87

2.10

Pa_5_4470

PaTRS130

6

0.87

3.94

Pa_7_7880

PaIRS4

1

0.86

2.79

Pa_1_11020

PaATG6

7

0.84

3.48

Pa_1_5330

PaRPD3a

2

0.81

1.65

Pa_4_2219

Pa_4_2219

TH

0.79

4.96

Pa_2_12420

PaNBR1

3

0.78

3.13

Pa_6_1830

PaVPS15

7

0.77

2.40

Pa_2_2450

Pa_2_2450

TH

0.72

3.38

  1. For ten proteins, the corresponding transcripts were up-regulated during aging (see expression profiles in Fig. 3 of the nodes marked by red arrows). The higher the Pearson correlation coefficient the straighter increases the related expression profile or the number of gene products, respectively. TH indicates that the protein was not assigned to any module, since it was only found in the yeast two-hybrid analysis. The last column gives the ratio of the transcript abundance from the first to the last day of measurement. The protein identifiers were adopted from the P. anserina genome database