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Table 1 Set of 36 phenotypes obtained from the listed siRNA experiments sorted by its CMPO identifier

From: Erratum to: How can functional annotations be derived from profiles of phenotypic annotations?

Experiment Description Phenotypes IDs in CMPO
CellMorph [3] Genome-wide RNAi screen that examines changes in the morphology of individual HeLa cells within cell populations. - Decreased cell number
- Cell with projections
- Elongated cell
- More lamellipodia cells
- Increased number of actin filament
- Round cell
- Increased cell size
- Decreased cell size
- Bright nuclei
- Metaphase arrested
- Increased cell size in population
CMPO:0000052
CMPO:0000071
CMPO:0000077
CMPO:0000083
CMPO:0000105
CMPO:0000118
CMPO:0000128
CMPO:0000129
CMPO:0000154
CMPO:0000305
CMPO:0000340
MitoCheck [2] Genome-wide RNAi screen for genes required for chromosome segregation in HeLa cells. The screen also reports genes involved in other processes such as cell movement. - Cell death
- Increased nucleus size
- Graped micronucleus
- Abnormal nucleus shape
- Mitosis delayed
- Binuclear cell
- Absence of mitotic chromosome decondensation
- Increased cell movement speed
- Increased cell movement distance
- Proliferating cells
- Metaphase delayed
- Abnormal chromosome segregation
- Prometaphase delayed
- Increased variability of nuclear shape in population
- Mitotic metaphase plate congression
CMPO:0000030
CMPO:0000140
CMPO:0000156
CMPO:0000157
CMPO:0000202
CMPO:0000213
CMPO:0000216
CMPO:0000236
CMPO:0000237
CMPO:0000241
CMPO:0000307
CMPO:0000326
CMPO:0000344
CMPO:0000345
CMPO:0000348
EMBL secretion [4] Genome-wide RNAi screen for interference with ER-to-plasma membrane transport of the secretory cargo protein tsO45G in HeLa cells. - Increased rate of protein secretion
- Mild decrease in rate of protein secretion
- Strong decrease in rate of protein secretion
- Decreased rate of intracellular protein transport
CMPO:0000246
CMPO:0000318
CMPO:0000319
CMPO:0000346
GR00053 [10] Genome-wide RNAi screen for genes involved in DNA damage responses in HeLa cells. - Increased number of site of double-strand break CMPO:0000182
GR00290 [9] Genome-wide RNAi screen for genes regulating centriole formation in HeLa cells. - Increased centriole replication
- Decreased centriole replication
CMPO:0000361
CMPO:0000362
Copenhagen DNA damage Ubiquitin [8] RNAi screen of >1300 genes involved in the ubiquitin-proteasome system or encoding zinc-finger proteins looking for modulators of cellular responses to ionizing radiation in HeLa and U2OS cells. - Decreased number of site of double-strand brea CMPO:0000181
EMBL chromosome condensation [7] RNAi screen of 100 bioinformatically-selected genes for changes in mitotic prophase duration in HeLa cells. - Increased duration of mitotic prophase
- Decreased duration of mitotic prophase
CMPO:0000328
CMPO:0000329