Skip to main content
Fig. 1 | BMC Bioinformatics

Fig. 1

From: AD-LIBS: inferring ancestry across hybrid genomes using low-coverage sequence data

Fig. 1

AD-LIBS accuracy using simulated data. a, c, and e refer to simulations with a single polar-brown bear admixture event 12,000 years ago, followed by isolation (single-pulse model); b, d, and f refer to simulations in which a brown-polar bear admixture event 12,000 years ago is followed by continual breeding with unadmixed brown bears (migration model). a and b: percent of AD-LIBS inferences correct and percent of true ancestry recovered in each ancestry state (homozygous polar bear, heterozygous, and homozygous brown bear) for each individual. c and d: Effect of using different numbers of reference ancestral individuals (1, 2, 3, 4, or 5 from each population) on overall accuracy, using 10kb windows. Asterisks denote a distribution mean significantly lower (p < 0.001) than the best distribution (5 individuals from both populations), according to t-test. e and f: Effect of using different window sizes (5kb, 10kb, and 25kb), with 5 reference bears from each ancestral population. Asterisks denote a distribution mean significantly lower (p < 0.001) than the best distribution (10kb windows), according to t-test

Back to article page