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Table 5 Numbers of variants obtained from four polar bears (PB7, PB12, PB68, and PB105), three brown bears (OFS01, RF01, and SJS01), and four ABC Islands bears (ABC01, ABC05, Adm2, and Bar) at different levels of coverage along the longest polar bear genomic scaffold

From: AD-LIBS: inferring ancestry across hybrid genomes using low-coverage sequence data

Coverage level # Raw variants # Filtered # Phased
10 490,705 410,174 410,174
5 443,470 288,761 288,821
2 353,433 44,706 44,706
1 268,595 1,494 1,494
0.5 172,214 14 14
  1. At low coverage, marker density is too low for tools like HAPMIX to be useful or accurate