Table 5 Numbers of variants obtained from four polar bears (PB7, PB12, PB68, and PB105), three brown bears (OFS01, RF01, and SJS01), and four ABC Islands bears (ABC01, ABC05, Adm2, and Bar) at different levels of coverage along the longest polar bear genomic scaffold
From: AD-LIBS: inferring ancestry across hybrid genomes using low-coverage sequence data
Coverage level | # Raw variants | # Filtered | # Phased |
|---|---|---|---|
10 | 490,705 | 410,174 | 410,174 |
5 | 443,470 | 288,761 | 288,821 |
2 | 353,433 | 44,706 | 44,706 |
1 | 268,595 | 1,494 | 1,494 |
0.5 | 172,214 | 14 | 14 |