3-mer pairs | ||||||
---|---|---|---|---|---|---|
|w 1| | AAA | GAA | ||||
|w 2| | GAA | AGA | ||||
|w 3| | AAG | AAA | ||||
‘A’ | \(\frac {1}{D}(|w_{1}|+|w_{3}|)\) | \(\frac {1}{D}(|w_{1}|+|w_{2}|+|w_{3}|)\) | \(\frac {1}{D}(|w_{1}| +|w_{2}|)\) | \(\frac {1}{D}(|w_{2}|+|w_{3}|)\) | \(\frac {1}{D}(|w_{1}|+|w_{3}|)\) | \(\frac {1}{D}(|w_{1}|+|w_{2}|+|w_{3}|)\) |
‘C’ | 0 | 0 | 0 | 0 | 0 | 0 |
‘G’ | \(\frac {1}{D}(|w_{2}|)\) | 0 | \(\frac {1}{D}(|w_{3})\) | \(\frac {1}{D}(|w_{1}|)\) | \(\frac {1}{D}(|w_{2})\) | 0 |
‘T’ | 0 | 0 | 0 | 0 | 0 | 0 |
p | 1 | 2 | 3 | 4 | 5 | 6 |