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Table 3 Comparison of performances of 10 top-ranking OLMDT among various types of features and datasets in terms of 10-fold cross-validation

From: AnkPlex: algorithmic structure for refinement of near-native ankyrin-protein docking

Rank

OLMDT

PRES(%)

REC(%)

ACC(%)

#PPTRN

1

ABDEHIJK_g14

82.10 ± 8.49

70.58 ± 15.03

6.96 ± 4.82

6

2

ADEFHIK_g25

81.64 ± 9.08

72.05 ± 14.65

7.05 ± 5.06

6

3

ABDEGHIJK_g14

81.14 ± 8.83

73.66 ± 16.61

6.83 ± 4.68

6

4

BCEGHIJK_g13

81.04 ± 8.37

72.88 ± 14.37

6.03 ± 3.31

6

5

AEFGHJK_g36

81.03 ± 8.71

73.85 ± 13.05

6.91 ± 5.17

6

6

ABFIJK_g16

80.84 ± 8.48

69.17 ± 14.68

6.33 ± 4.32

6

7

ABDEFGIJK_g25

80.84 ± 7.98

75.54 ± 8.88

6.41 ± 3.80

6

8

ABIJK_g16

80.82 ± 8.43

69.17 ± 14.68

6.31 ± 4.31

6

9

ABCGHJK_g13

80.80 ± 7.86

73.55 ± 12.44

6.30 ± 3.98

6

10

ABDEFGIK_g25

80.78 ± 8.09

75.67 ± 9.12

6.38 ± 3.73

6

  1. 11 feathers (A, B, C, D, E, F, G, H, I, J, K) are ZDock, ZRankElec, ZRank, ZRankSolv, ZRankVdw, E_vdw1, E_elec1, E_vdw2, E_elec2, E_sol, E_RDock