Table 1 Example of information extracted from the GenBank file and stored in geminivirus.org
From: Geminivirus data warehouse: a database enriched with machine learning approaches
TAGs | Value |
|---|---|
LOCUS | KJ939916 |
DEFINITION | Soybean chlorotic spot virus isolate BR:Flt14:11 segment DNA-A, complete sequence. |
ORGANISM | Soybean chlorotic spot virus |
PUBMED | 25028472 |
AUTHORS | Sobrinho,R.R., Xavier,C.A.D., Pereira,H.M.B., Lima,G.S.A.,,Assuncao,I.P., Mizubuti,E.S.G., Duffy,S. and Zerbini,F.M. |
.,JOURNAL Submitted | Departamento de Fitopatologia, BIOAGRO, Universidade Federal de Vicosa, Av. Peter Henry Rolfs s/n, Vicosa, Minas Gerais 36570–900, Brazil |
Assembly Method | CodonCode Aligner v. 4.1.1 DEMO |
Sequencing Technology | Sanger dideoxy sequencing |
host | Macroptilium lathyroides |
taxon | 1221206 |
country | Brazil |
segment | DNA-A |
lat_lon | |
collection_date | 18-Mar-2012 |
collected_by | |
CDS | 199..954 |
gene | |
note | coat protein |
product | CP |
protein_id | AIN36521.1 |
translation | MVKRDAPWRHMAGTSKVSRSSNFSPRGGGGPKNNRTSEWVNRPM … |
ORIGIN | ACCGGATGGCCGCGCGATTTTTTATGGGCCTTATCTTTTGGCTCGTTCTTTTGGACCGAGTGTATTTGAATTAAAGTAAAGTTATTCCCTGTCCAA................ |