Zipper plot: visualizing transcriptional activity of genomic regions

BMC Bioinformatics

Table 1 Distribution of junction reads (JR) from 1460 TCGA samples connecting protein-coding gene exons with a downstream mono and multi-exonic lncRNA

	1 < = JR < = 10	11 < = JR < = 100	JR > 100	Total
Protein coding gene + mono-exonic lncRNA	86	37	12	135
Protein coding gene + multi-exonic lncRNA	81	31	15	127

These junction reads suggest that the latter are actually extensions of untranslated regions from upstream protein coding genes. Detailed information for each individual case can be found on Additional file 3: Table S2

ISSN: 1471-2105