Table 4 Completeness and contamination for nine ICoVeR-refined genome bins for Sharon’s dataset
From: ICoVeR – an interactive visualization tool for verification and refinement of metagenomic bins
Bina | Marker lineageb | ICoVeR | MaxBin2c | MyCCc | CONCOCTc | MetaBATc | GroopMc | ||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Compl. % | Cont. % | Compl. % | Cont. % | Compl. % | Cont. % | Compl. % | Cont. % | Compl. % | Cont. % | Compl. % | Cont. % | ||
1 | Lactobacillales (UID544) | 99.2 | 0 | 99.2 | 0 | 99.2 | 0 | 100 | 204.2 | 99.2 | 0 | 99.2 | 0 |
2 | Clostridiales (UID1120) | 98.9 | 0 | 98.9 | 0 | 98.9 | 0 | 98.9 | 0 | 98.9 | 0 | NB | |
3 | Actinomycetales (UID1530) | 97.9 | 0 | 22.4 | 0 | 97.9 | 0 | 97.9 | 0 | 100 | 37.9 | 97.9 | 0 |
66.9 | 0 | ||||||||||||
4 | Staphylococcus (UID301) | 99.5 | 0.1 | 99.5 | 0.1 | 99.5 | 0.1 | 99.5 | 2.9 | 99.5 | 2.9 | 99.5 | 0.1 |
5 | Staphylococcus (UID294) | 95.9 | 0 | 97 | 1.1 | 100 | 104.2 | 100 | 204.2 | 100 | 108.3 | 100 | 104.2 |
6 | Staphylococcus (UID294) | 97.9 | 2.8 | 97.9 | 3.4 | ||||||||
7 | Staphylococcus (UID298) | 95.4 | 0.6 | 100 | 24.4 | 95.4 | 0.6 | 95.4 | 0.6 | 95.4 | 0.6 | 95.8 | 1.7 |
8 | Staphylococcus (UID298) | 84.1 | 0 | 84.9 | 2.5 | 78.7 | 0 | 84.1 | 0 | 84.1 | 0 | 82.5 | 3.0 |
9 | Leuconostocaceae (UID486) | 45.1 | 0.2 | 72.8 | 37.9 | 45.1 | 0.2 | 45.1 | 0.2 | 37.7 | 0 | 24.7 | 0 |