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Table 5 Accuracy of HLA typing using data from nine families. Results obtained at the four-digit level are summarized in this table. A total of 520 alleles were examined with 94% accuracy (489 correct), 2.3% (12 cases) missed, and 3.7% (19 cases) mistyped

From: HLAscan: genotyping of the HLA region using next-generation sequencing data

9 families 90× (10 individuals) 60× (17 individuals) 30× (25 individuals)
  # alleles correct missing wrong # alleles correct missing wrong # alleles correct missing wrong
HLA-A 20 20 0 0 34 32 0 2 50 47 2 1
HLA-B 20 20 0 0 34 33 0 1 50 45 1 4
HLA-C 20 20 0 0 34 33 0 1 50 49 1 0
HLA-DQB1 20 20 0 0 34 33 0 1 50 50 0 0
HLA-DRB1 20 20 0 0 34 33 0 1 50 49 1 0
All 100 100 0 0 170 164 0 6 250 240 5 5
Percentage   100 0 0   96.5 0 3.5   96 2 2