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Table 1 General information about used microarray data sets

From: Ranking metrics in gene set enrichment analysis: do they matter?

GEO Target KEGG ID Disease/KEGG pathway name Tissue Sample Size (Control+Case)
GSE1145 hsa:05414 Dilated cardiomyopathy Left Ventricle 26 (11+15)
GSE14924_CD4 hsa:05221 Acute myeloid leukemia CD4 T cells 20 (10+10)
GSE14924_CD8 hsa:05221 Acute myeloid leukemia CD8 T cells 21 (11+10)
GSE16759 hsa:05010 Alzheimer’s disease Parietal lobe 8 (4+4)
GSE24739_G0 hsa:05220 Chronic myeloid leukemia Peripheral blood 12 (4+8)
GSE24739_G1 hsa:05220 Chronic myeloid leukemia Peripheral blood 12 (4+8)
GSE32676 hsa:05212 Pancreatic cancer Pancreas 32 (7+25)
GSE4183 hsa:05210 Colorectal cancer Colon 23 (8+15)
GSE1297 hsa:05010 Alzheimer’s disease Hipopocampal CA1 16 (9+7)
GSE14762 hsa:05211 Renal Cancer Kidney 21 (12+9)
GSE19188 hsa:05223 Non-small cell lung cancer Lung 153 (62+91)
GSE19728 hsa:05214 Glioma Brain 21 (4+17)
GSE20153 hsa:05012 Parkinson’s disease Lymphoblasts 16 (8+8)
GSE20291 hsa:05012 Parkinson’s disease Ppstmortem brain putmen 33 (19+14)
GSE21354 hsa:05214 Glioma Brain, Spine 17 (4+13)
GSE3585 hsa:05414 Dilated cardiomyopathy Subendocardial left ventricle 12 (5+7)
GSE4107 hsa:05210 Colorectal cancer Mucosa 22 (10+12)
GSE5281_EC hsa:05010 Alzheimer’s disease Entorhinal cortex 21 (12+9)
GSE5281_HIP hsa:05010 Alzheimer’s disease Hippocampus 23 (13+10)
GSE5281_VCX hsa:05010 Alzheimer’s disease Primary visual cortex 31 (12+19)
GSE781 hsa:05211 Renal Cancer Kidney 17 (5+12)
GSE8762 hsa:05016 Huntington’s disease Lymphocytes 22 (10+12)
GSE9348 hsa:05210 Colorectal cancer Colon 82 (12+70)
GSE9476 hsa:05221 Acute myeloid leukemia Peripheral Blood 63 (37+26)
GSE6344 hsa:05211 Renal Cancer Kidney 20 (9+11)
GSE15641 hsa:05211 Renal Cancer Kidney 55 (23+32)
GSE14994 hsa:05211 Renal Cancer Kidney 30 (8+22)
GSE11024 hsa:05211 Renal Cancer Kidney 22 (12+10)