Numerical integration methods and layout improvements in the context of dynamic RNA visualization

BMC Bioinformatics

Table 2 The RNA structures chosen for comparison between the forward and backward Euler methods

#	RNA	Original	Length	Reference
	STRAND ID	ID	(nt)
1	NDB_00051	PDB: 1VTQ	75	[40]
2	PDB_01255	PDB: 2R8S	159	[41]
3	PDB_01076	PDB: 2GO5	217	[42]
4	PDB_00985	PDB: 2CZJ	248	[43]
5	PDB_00528	PDB: 1KOG	304	[44]
6	PDB_00398	PDB:1FCW	380	[45]
7	PDB_01144	PDB: 2J37	408	[46]
8	SRP_00288	SRPDB: Sacc.cere._M28116	522	[47]
9	RFA_00829	Rfam: RF00551	551	[48]
10	CRW_00736	CRW: a.I2.c.N.tabacum.B.ND2	696	[35]
11	CRW_00731	CRW: a.I2.c.N.tabacum.A.trnI.i1	772	[35]
12	CRW_00757	CRW: a.I2.m.Z.mays.A.OX2.i1	912	[35]
13	CRW_00533	CRW: d.233.m.C.elegans	953	[35]
14	CRW_00540	CRW: d.233.m.L.terrestris	1279	[35]
15	CRW_00539	CRW: d.233.m.L.bleekeri	1333	[35]
16	CRW_00742	CRW: a.I2.m.A.aegerita.B.LSU.2059	1857	[35]
17	CRW_00534	CRW: d.233.m.C.eugametos	1915	[35]

ISSN: 1471-2105