Table 3 Selected conditional attributes of PTC (Papillary Thyroid Carcinoma) dataset
Name | Description |
|---|---|
BRAFV600ERAFClass | Flag indicating if tumor is driven by BRAF or RAS genes |
BRAFV600E_RAS_score | Continuous score from (−1,1) interval describing to what extent a tumor expression profile resembles BRAF- or RAS-mutant profiles |
mRNA_cluster_number | Number of mRNA expression cluster (1–5) |
miRNA_cluster_number | Number of microRNA expression cluster (1–6) |
RPPA_cluster_number | Number of protein expression cluster (1–4) |
meth_cluster | DNA methylation pattern (one of four) |
Arm_SCNA_cluster | Chromosomal arm-level copy number alterations pattern (one of four) |
nmut_APOBEC | Mutation density (mutations/Mb) associated with APOBEC cytidine deaminases |
nmut_CpGT | Mutation density (mutations/Mb) of CpG islands |
person_gender | Gender |
race_category | Race (Black/White/Asian/American Indian) |
ethnicity_category | Ethnicity (Hispanic/Non-Hispanic) |