Ub-ISAP: a streamlined UNIX pipeline for mining unique viral vector integration sites from next generation sequencing data

Table 1 Results of IS analysis of NGS datasets by Ub-ISAP

Sample	Single/Paired end reads	# Reads	Reads filtered	Reads aligned zero mismatch	Reads aligned one mismatch	Reads aligned two mismatches	Unique IS	TSS Proximal	Intragenic	Intergenic
1	Single	675,969	200,526	101,622	100,027	67,201	1981	391	793	797
2	Single	584,650	162,394	78,236	76,808	51,210	1789	399	631	756

ISSN: 1471-2105