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Table 3 Comparison of IS analysis of published data [24] for Paris (P) and London (L) samples with Ub-ISAP

From: Ub-ISAP: a streamlined UNIX pipeline for mining unique viral vector integration sites from next generation sequencing data

Dataset

Total ISs

TSS-proximal

Intragenic

Intergenic

P-[24]

250,215

66,991 (26.77%)

108,033 (43.18%)

75,191 (30.05%)

P-Ub-ISAP

255,502

60,588 (24%)

110,101 (43%)

84,813 (33%)

L-[24]

54,424

12,538 (23.03%)

23,355 (42.91%)

18,532 (34.06%)

L-Ub-ISAP

61,067

12,269 (20%)

25,898 (42%)

22,900 (37%)