Table 7 Numbers of RBH found using data from SparkBLAST cloud processing
From: SparkBLAST: scalable BLAST processing using in-memory operations
Kineococcus | Desulfovibrio | Desulfovibrio | Rhodobacter | Escherichia | Deinococcus | Desulfovibrio | Shewanella | Geobacter | Deinococcus | Geobacter | Name | Accession | Number of |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
radiotolerans | desulfuricans | vulgaris | sphaeroides | coli | radiodurans | fructosivorans | oneidensis | sulfurreducens | geothermalis | metallireducens | Number | proteins | |
224 | 43 | 25 | 63 | 35 | 53 | 22 | 21 | 18 | 52 | 20 | Kineococcus | NC_009660.1 | 4,632 |
radiotolerans | |||||||||||||
380 | 264 | 121 | 79 | 38 | 163 | 71 | 88 | 27 | 60 | Desulfovibrio | NC_011883.1 | 10,443 | |
desulfuricans | |||||||||||||
362 | 62 | 46 | 17 | 98 | 53 | 47 | 24 | 37 | Desulfovibrio | NC_002937.3 | 12,349 | ||
vulgaris | |||||||||||||
572 | 114 | 46 | 46 | 98 | 77 | 50 | 44 | Rhodobacter | NC_009429.1 | 20,954 | |||
sphaeroides | |||||||||||||
98 | 24 | 26 | 155 | 34 | 28 | 26 | Escherichia | NC_000913.3 | 4,140 | ||||
coli | |||||||||||||
122 | 15 | 21 | 27 | 102 | 17 | Deinococcus | NC_001263.1 | 7,671 | |||||
radiodurans | |||||||||||||
84 | 20 | 40 | 17 | 38 | Desulfovibrio | NZ_AECZ01000069.1 | 4,028 | ||||||
fructosivorans | |||||||||||||
90 | 36 | 21 | 32 | Shewanella | NC_004349.1 | 8,271 | |||||||
oneidensis | |||||||||||||
146 | 20 | 120 | Geobacter | NC_002939.5 | 9,340 | ||||||||
sulfurreducens | |||||||||||||
34 | 16 | Deinococcs | NC_008010.2 | 2,935 | |||||||||
geothermalis | |||||||||||||
50 | Geobacter | NC_007517.1 | 3,592 | ||||||||||
metallireducens |