Table 1 Each column represents a sample (S) from the input or output condition. Each row represents an insertion site in a particular gene in the bacterial genome. Each entry is the read counts mapped to a particular insertion site in a particular gene for a particular sample
From: TnseqDiff: identification of conditionally essential genes in transposon sequencing studies
| Â | Â | Pool I | Pool II | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Â | Â | Input | Output | Input | Output | ||||||
Gene | Location | S1 | S2 | S1 | S2 | S3 | S1 | S2 | S1 | S2 | S3 |
1 | 110 | 478 | 500 | 90 | 100 | 121 | 0 | 0 | 0 | 0 | 0 |
1 | 150 | 810 | 910 | 120 | 10 | 5 | 810 | 910 | 120 | 10 | 5 |
1 | 350 | 910 | 700 | 50 | 80 | 37 | 0 | 0 | 0 | 0 | 0 |
1 | 400 | 1522 | 1544 | 142 | 150 | 124 | 1522 | 1544 | 142 | 150 | 124 |
1 | 520 | 320 | 240 | 50 | 1170 | 132 | 320 | 240 | 50 | 1170 | 132 |
1000 | 3110 | 100 | 120 | 20 | 10 | 30 | 210 | 190 | 20 | 0 | 70 |