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Fig. 4 | BMC Bioinformatics

Fig. 4

From: CRISPulator: a discrete simulation tool for pooled genetic screens

Fig. 4

An example sgRNA activity distribution for a simulated CRISPRi library. The 80–90% high quality guides is typical for second-generation CRISPRi [8] libraries. We define high quality sgRNAs as sgRNAs that have high activity and lead to a > 60% knockdown. Low quality sgRNAs are essentially indistinguishable from the negative controls and will lead to minimal effects on phenotype as they cause <20% knockdown of a given gene

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