Fig. 6
From: Assessment of genome annotation using gene function similarity within the gene neighborhood
Gene shuffling experiments with E. coli. a Shuffle for Nr = 100. b Shuffle for Nr = 10. c Shuffle summary. a and b The distributions of PAC values were plotted for the shuffled assignments with E. coli. In each experiment, the Nr pairs of genes with annotations by GO terms were randomly selected and gene annotations in each pair were exchanged. For each Nr, the experiment was repeated 100 times, and the plots represent the average number of genes with the SD observed for each probability bin. c The average (black dot), SD (vertical lines), and maximum and minimum (white dot) number of genes were presented for the probability bin [0.95, 1.00] for Nr = 10, 25, 50, 100, 200, and up to 1000 (shown on the x-axis)