Skip to main content

Table 5 Results of gene function prediction on H. sapiens (archived date: May, 2016)

From: NoGOA: predicting noisy GO annotations using evidences and sparse representation

  BP CC MF
  Original NoGOA Original NoGOA Original NoGOA
MicroAvgF1 92.85 92.64 93.72 93.92 93.10 93.10
MacroAvgF1 89.04 90.05 88.06 89.96 89.55 90.30
AvgPrec 88.45 88.50 88.75 89.19 90.78 90.81
AvgROC 94.94 96.73 95.12 96.66 97.66 98.35
Fmax 93.85 93.50 93.85 93.89 94.62 94.57
Smin 8.69 7.96 2.09 2.09 2.40 2.32
  1. The data in boldface denote the better result. ‘Original’ directly uses annotations in the historical GOA file to predict gene function; ‘NoGOA’ removes predicted noisy annotations from the historical GOA file and then predicts gene function. means the lower the value, the better the performance is