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Fig. 4 | BMC Bioinformatics

Fig. 4

From: Assessing the model transferability for prediction of transcription factor binding sites based on chromatin accessibility

Fig. 4

Performance of cross-TF predictions. The TFs shown in Y-axis were used for training and the binding sites of TFs shown in X-axis were predicted. The cells highlighted in blue boxes are the self-prediction, which were used as a benchmark. The models were constructed from a TF motif in GM12878. The color showed the AUC for each prediction. The bottom panel shows the results using CENTIPEDE, DNASE2TFand HINT-BC for these TFs

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