Table 1 A list of built-in queries in the database
Built-in Queries | Notes |
|---|---|
Co-expression Network | Based on direct or inferred expression |
GO Term / Pathway Enrichment | Given a list of genes |
Identify nearest genes to SNP markers | Given a set of coordinates |
Biological Processes | Given a list of genes |
Identify Orthologs | For given genes, for all species in the database |
Expression Data | For a given set of genes |
GWAS Annotation | Annotate a set of SNPs with nearest gene, genic or not, expression patterns, GO categories and EC categories, plus additional data. |
Annotation Translation | Given a list of genes and two or more genome versions of an annotation. Anchored BACs can also facilitate translation. |