Table 8 Number of Pfam Candidate domains, proteins with candidate domains and specific domains and proteins for each cancer type
Cancer type | Number of Pfam candidate domains | Number of Proteins with Pfam candidate domains | Number of Pfam specific candidate domains | Number of Pfam specific proteins |
|---|---|---|---|---|
ACC | 57 | 323 | 23 | 47 |
BLCA | 51 | 1076 | 15 | 64 |
BRCA | 31 | 495 | 4 | 11 |
CHOL | 39 | 45 | 19 | 21 |
COAD | 35 | 955 | 6 | 7 |
ESCA | 25 | 355 | 4 | 5 |
GBM | 24 | 474 | 6 | 8 |
HNSC | 42 | 743 | 5 | 42 |
KICH | 55 | 200 | 21 | 23 |
KIRC | 90 | 494 | 54 | 157 |
KIRP | 36 | 84 | 22 | 44 |
LGG | 25 | 366 | 3 | 15 |
LIHC | 25 | 432 | 5 | 9 |
LUAD | 115 | 2328 | 27 | 248 |
LUSC | 31 | 1128 | 5 | 8 |
OV | 11 | 188 | 6 | 6 |
PAAD | 143 | 793 | 70 | 151 |
PCPG | 70 | 151 | 20 | 44 |
PRAD | 34 | 353 | 13 | 20 |
READ | 29 | 266 | 10 | 17 |
SARC | 25 | 383 | 7 | 11 |
SKCM | 40 | 1116 | 11 | 25 |
STAD | 52 | 1476 | 10 | 35 |
TGCT | 66 | 366 | 29 | 43 |
THCA | 38 | 304 | 15 | 19 |
THYM | 18 | 41 | 5 | 5 |
UCEC | 23 | 1094 | 3 | 16 |
UCS | 44 | 57 | 19 | 27 |
UVM | 63 | 99 | 22 | 34 |
Pan-cancer | 222 | 3685 | 27 | 315 |