C-State Feature | UCSC | IGV | WashU | JBrowse | CHROMATRA | CisGenome | Epiviz | visPIG |
---|---|---|---|---|---|---|---|---|
Simultaneous display of multiple user-specified loci | ❌ | ❌ | ❌ | ❌ | ❌ | ❌ | ❌ | ✓ |
Multiple features tracks | ✓ | ✓ | ✓ | ✓ | ❌ | ✓ | ✓ | ✓ |
Concomitant display of gene expression data | ✓ | ✓ | ✓ | ✓ | ❌ | ❌ | ✓ | ❌ |
Comparison of user-generated and published datasets | ✓ | ✓ | ✓ | ✓ | ❌ | ✓ | ✓ | ✓ |
Versatile filters to allow selection of user defined patterns | ❌ | ❌ | ❌ | ❌ | ❌ | ❌ | ✓ | ❌ |
Interactive plotting | ✓ | ✓ | ✓ | ✓ | ❌ | ✓ | ✓ | ❌ e |
Modular and Extensible | ❌ | ❌ | ❌ | ✓ | ✓ | ❌ | ✓ | ❌ |
OS agnostic (works on multiple platforms) | ✓ | ✓ | ✓ | ✓ | NA c | ✓ | ✓ | ✓ |
Programming knowledge not required | ✓ | ✓ | ✓ | ❌ | ✓ | ✓ | ❌ | ✓ |
Prior dependencies not required | NA | ✓ a | NA | ❌ | ❌ | ❌ | ❌ | ❌ |
Runs locally | ❌ | ✓ | ❌ | ✓ b | ✓ d | ✓ | ✓ | ✓ |
Open source license | ✓ | ✓ | ✓ | ✓ | ✓ | ✓ | ✓ | ✓ |