Fig. 6

The feature analysis results of PSSM-RT on PDNA-62. a The discriminant weights of the 400 features extracted from PSSM-RT. The x axis and y axis denote the 20 residue types. Every element denotes a specific pair-relationship. b 6 DNA-binding residues and its context residues extracted from the protein in 1u1q. The red residues are the binding residues and the yellow ones are the residues that can form important pair-relationship with it. The rest ones are the unimportant residues. The black polyline are the important pair-relationships