MegaGTA | Xander | MEGAHIT | ||||
---|---|---|---|---|---|---|
Gene rplB | ||||||
Cluster Identity | 99% | 95% | 99% | 95% | 99% | 95% |
# of gene contigs aligned by Framebot | 17,668 | 5079 | 15,933 | 4237 | 578 | 465 |
Total length (bp) | 13.9 M | 3.96 M | 12.5 M | 3.32 M | 378 k | 311 k |
Median length (bp) | 822 | 822 | 822 | 822 | 639 | 660 |
# of matched reference genes | 491 | 427 | 456 | 385 | 208 | 193 |
Median % aa identity | 76.73 | 76.00 | 77.46 | 76.90 | 77.50 | 77.07 |
Gene nifH | ||||||
Cluster Identity | 99% | 95% | 99% | 95% | 99% | 95% |
# of gene contigs aligned by Framebot | 33 | 11 | 31 | 10 | 9 | 5 |
Total length (bp) | 27.8 k | 9225 | 25.3 k | 8412 | 7368 | 4464 |
Median length (bp) | 888 | 888 | 882 | 883.5 | 930 | 930 |
# of matched reference genes | 13 | 10 | 12 | 8 | 8 | 5 |
Median % aa identity | 91.55 | 90.54 | 92.96 | 91.19 | 85.14 | 83.99 |
Gene nirK | ||||||
Cluster Identity | 99% | 95% | 99% | 95% | 99% | 95% |
# of gene contigs aligned by Framebot | 1336 | 392 | 1242 | 336 | 203 | 179 |
Total length (bp) | 1.09 M | 321 k | 1.02 M | 277 k | 170 k | 153 k |
Median length (bp) | 687 | 787.5 | 690 | 748.5 | 735 | 750 |
# of matched reference genes | 55 | 53 | 50 | 47 | 71 | 66 |
Median % aa identity | 89.29 | 86.61 | 89.06 | 87.30 | 66.41 | 65.97 |