From: A sensitive short read homology search tool for paired-end read sequencing data
Case | HMMER, | HMMER, | HMMER, | Short-Pair |
---|---|---|---|---|
E-value 10 | w/o filtration, | GA cutoff | ||
E-value 10 | ||||
Case 1 | 34.51% | 32.83% | 22.51% | 0.42% |
Case 2 | 28.42% | 31.58% | 8.84% | 62.51% |
Case 3 | 37.07% | 35.59% | 68.65% | 37.07% |