Table 2 Initial assessments of the effects of tuple length and Markov order of the background sequences on the performance of MaxBin+ \( {d}_2^S\mathrm{Bin} \) in terms of recall, precision and ARI for dataset 10genome-80×
10genome-80× | Recall(%) | Precision(%) | ARI(%) | ||
|---|---|---|---|---|---|
MaxBin | 93.48 | 93.48 | 90.96 | ||
MaxBin+\( {d}_2^S\mathrm{Bin} \) | k = 4 | r = 0 | 96.42 | 96.42 | 95.57 |
r = 1 | 93.99 | 93.99 | 90.86 | ||
r = 2 | 86.35 | 86.35 | 76.18 | ||
k = 5 | r = 0 | 96.83 | 96.83 | 96.03 | |
r = 1 | 95.40 | 95.40 | 93.19 | ||
r = 2 | 92.53 | 92.53 | 87.72 | ||
r = 3 | 59.71 | 60.91 | 37.18 | ||
k = 6 | r = 0 | 96.93 | 96.93 | 96.05 | |
r = 1 | 96.01 | 96.01 | 94.57 | ||
r = 2 | 94.24 | 94.24 | 91.40 | ||
r = 3 | 81.28 | 83.77 | 71.56 | ||
k = 7 | r = 0 | 94.41 | 94.41 | 92.08 | |
r = 1 | 93.26 | 93.26 | 91.92 | ||
r = 2 | 92.42 | 92.42 | 90.67 | ||
r = 3 | 65.88 | 77.73 | 50.48 | ||
k = 8 | r = 0 | 88.26 | 82.94 | 80.04 | |
r = 1 | 87.17 | 88.09 | 84.78 | ||
r = 2 | 87.19 | 87.12 | 82.73 | ||
r = 3 | 60.08 | 73.08 | 46.46 | ||