From: Interpretation of microbiota-based diagnostics by explaining individual classifier decisions
Species name | IS-pro peak(s) | Common habitat | Ranked top 15 by: |
---|---|---|---|
Alistipes finegoldii | 230/231/395/396/400/407 | Gut | all |
Alistipes putredinis | 235/236 | Gut | all |
Bacteroides vulgatus | 478/479 | Gut | all |
Bacteroides fragilis | 537 | Gut | all |
Clostridium perfringens | 235 | Gut | all |
Streptococcus mitis | 296/297 | Skin | all |
Staphylococcus epidermidis | 312/313 | Skin | svm, nsc, lr |
Prevotella sp. | 437/438 | Gut | svm, rf, lr |
Bacteroides sp. | 474 | Gut | svm, rf, nsc |
Lactobacillus paracasei | 294 | Gut | svm, nsc |
Staphylococcus epidermidis | 303 | Skin | nsc, lr |
Streptococcus sp. | 321 | Gut | nsc, lr |
Bifidobacterium adolescentis | 495 | Gut | nsc, lr |
Clostridium sp. | 231 | Gut | rf |
Odoribacter splanchnicus | 308 | Gut | rf |
Streptococcus sp. | 318 | Gut | rf |
Lactobacillus sp. | 478 | Gut | rf |
unclassified Proteobacterium | 941 | – | rf |
Lactococcus lactis | 344 | Gut | nsc |
Propionibacterium acnes | 269 | Skin | nsc |