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Table 2 Validation, on benchmark data, against published methods

From: An integrative approach to predicting the functional effects of small indels in non-coding regions of the human genome

 

Sensitivity

Specificity

Balanced accuracy

MCC

FATHMM-indel

0.905

0.887

0.896

0.793

CADD

0.669

0.934

0.802

0.626

GAVIN

0.611

0.934

0.773

0.576