From: Predicting enhancers with deep convolutional neural networks
Cell Type | AUROC | AUPRC | ||
---|---|---|---|---|
DeepEnhancer | gkmSVM | DeepEnhancer | gkmSVM | |
GM12878 | 0.874 | 0.784 | 0.875 | 0.819 |
H1-hESC | 0.923 | 0.869 | 0.919 | 0.861 |
HepG2 | 0.882 | 0.800 | 0.883 | 0.827 |
HMEC | 0.903 | 0.848 | 0.907 | 0.892 |
HSMM | 0.904 | 0.830 | 0.910 | 0.856 |
HUVEC | 0.898 | 0.824 | 0.905 | 0.870 |
K562 | 0.883 | 0.794 | 0.886 | 0.799 |
NHEK | 0.888 | 0.809 | 0.893 | 0.840 |
NHLF | 0.909 | 0.848 | 0.910 | 0.869 |
p-value | 1.9e-3 | 1.9e-3 |