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Table 3 Independent test of our GTB-based PredRBR and other existing methods on the RBP101 dataset

From: A boosting approach for prediction of protein-RNA binding residues

Method ACC SN SP Precision F-measure MCC
PredRBR 0.83 ± 0.12 0.59 ± 0.13 0.85 ± 0.11 0.28 ± 0.16 0.38 ± 0.15 0.32 ± 0.17
SNBRFinder 0.78 ± 0.15 0.65 ± 0.22 0.80 ± 0.13 0.25 ± 0.21 0.36 ± 0.18 0.31 ± 0.20
RNABindRPlus 0.80 ± 0.10 0.49 ± 0.30 0.84 ± 0.13 0.26 ± 0.26 0.34 ± 0.24 0.26 ± 0.22
BindN+ 0.81 ± 0.09 0.42 ± 0.18 0.85 ± 0.05 0.22 ± 0.24 0.29 ± 0.18 0.21 ± 0.17
RNABindR 2.0 0.71 ± 0.09 0.59 ± 0.22 0.72 ± 0.14 0.17 ± 0.16 0.27 ± 0.16 0.20 ± 0.12
PPRint 0.82 ± 0.09 0.35 ± 0.19 0.86 ± 0.06 0.20 ± 0.27 0.25 ± 0.17 0.17 ± 0.15
Liu-2010 0.73 ± 0.07 0.51 ± 0.19 0.72 ± 0.10 0.15 ± 0.14 0.23 ± 0.15 0.15 ± 0.11
BindN 0.69 ± 0.07 0.49 ± 0.15 0.70 ± 0.05 0.14 ± 0.20 0.22 ± 0.15 0.12 ± 0.13