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Table 3 Independent test of our GTB-based PredRBR and other existing methods on the RBP101 dataset

From: A boosting approach for prediction of protein-RNA binding residues

Method

ACC

SN

SP

Precision

F-measure

MCC

PredRBR

0.83 ± 0.12

0.59 ± 0.13

0.85 ± 0.11

0.28 ± 0.16

0.38 ± 0.15

0.32 ± 0.17

SNBRFinder

0.78 ± 0.15

0.65 ± 0.22

0.80 ± 0.13

0.25 ± 0.21

0.36 ± 0.18

0.31 ± 0.20

RNABindRPlus

0.80 ± 0.10

0.49 ± 0.30

0.84 ± 0.13

0.26 ± 0.26

0.34 ± 0.24

0.26 ± 0.22

BindN+

0.81 ± 0.09

0.42 ± 0.18

0.85 ± 0.05

0.22 ± 0.24

0.29 ± 0.18

0.21 ± 0.17

RNABindR 2.0

0.71 ± 0.09

0.59 ± 0.22

0.72 ± 0.14

0.17 ± 0.16

0.27 ± 0.16

0.20 ± 0.12

PPRint

0.82 ± 0.09

0.35 ± 0.19

0.86 ± 0.06

0.20 ± 0.27

0.25 ± 0.17

0.17 ± 0.15

Liu-2010

0.73 ± 0.07

0.51 ± 0.19

0.72 ± 0.10

0.15 ± 0.14

0.23 ± 0.15

0.15 ± 0.11

BindN

0.69 ± 0.07

0.49 ± 0.15

0.70 ± 0.05

0.14 ± 0.20

0.22 ± 0.15

0.12 ± 0.13