TY - JOUR AU - Wiese, K. C. AU - Glen, E. AU - Vasudevan, A. PY - 2005 DA - 2005// TI - jViz.Rna - A java tool for RNA secondary structure visualization JO - IEEE Trans Nanobioscience VL - 4 UR - https://doi.org/10.1109/TNB.2005.853646 DO - 10.1109/TNB.2005.853646 ID - Wiese2005 ER - TY - JOUR AU - Auber, D. AU - Delest, M. AU - Domenger, J. P. AU - Dulucq, S. PY - 2006 DA - 2006// TI - Efficient drawing of RNA secondary structure JO - J Graph Algorithms Appl VL - 10 UR - https://doi.org/10.7155/jgaa.00131 DO - 10.7155/jgaa.00131 ID - Auber2006 ER - TY - STD TI - Ponty Y, Leclerc F. Drawing and editing the secondary structure(s) of RNA. In: RNA Bioinforma. Springer: 2015. p. 63–100. ID - ref3 ER - TY - JOUR AU - Darty, K. AU - Denise, A. AU - Ponty, Y. PY - 2009 DA - 2009// TI - VARNA: Interactive drawing and editing of the RNA secondary structure JO - Bioinformatics VL - 25 UR - https://doi.org/10.1093/bioinformatics/btp250 DO - 10.1093/bioinformatics/btp250 ID - Darty2009 ER - TY - JOUR AU - Lorenz, R. AU - Bernhart, S. H. AU - zu Siederdissen, C. AU - Tafer, H. AU - Flamm, C. AU - Stadler, P. F. AU - Hofacker, I. L. PY - 2011 DA - 2011// TI - {ViennaRNA} Package 2.0 JO - Algorithms Mol Biol VL - 6 UR - https://doi.org/10.1186/1748-7188-6-26 DO - 10.1186/1748-7188-6-26 ID - Lorenz2011 ER - TY - JOUR AU - Hecker, N. AU - Wiegels, T. AU - Torda, A. E. PY - 2013 DA - 2013// TI - RNA secondary structure diagrams for very large molecules: RNAfdl JO - Bioinformatics VL - 29 UR - https://doi.org/10.1093/bioinformatics/btt496 DO - 10.1093/bioinformatics/btt496 ID - Hecker2013 ER - TY - JOUR AU - Elias, R. AU - Hoksza, D. PY - 2016 DA - 2016// TI - Rna secondary structure visualization using tree edit distance JO - Int J Biosci Biochem Bioinforma VL - 6 ID - Elias2016 ER - TY - JOUR AU - De Rijk, P. AU - De Wachter, R. PY - 1997 DA - 1997// TI - RnaViz, a program for the visualisation of RNA secondary structure JO - Nucleic Acids Res VL - 25 UR - https://doi.org/10.1093/nar/25.22.4679 DO - 10.1093/nar/25.22.4679 ID - De Rijk1997 ER - TY - JOUR AU - De Rijk, P. AU - Wuyts, J. AU - De Wachter, R. PY - 2003 DA - 2003// TI - Rna Viz 2: An improved representation of RNA secondary structure JO - Bioinforma VL - 19 UR - https://doi.org/10.1093/bioinformatics/19.2.299 DO - 10.1093/bioinformatics/19.2.299 ID - De Rijk2003 ER - TY - JOUR AU - Tai, K. C. PY - 1979 DA - 1979// TI - The Tree-to-Tree Correction Problem JO - J ACM VL - 26 UR - https://doi.org/10.1145/322139.322143 DO - 10.1145/322139.322143 ID - Tai1979 ER - TY - JOUR AU - Zhang, K. AU - Shasha, D. PY - 1989 DA - 1989// TI - Simple Fast Algorithms for the Editing Distance between Trees and Related Problems JO - SIAM J Comput VL - 18 UR - https://doi.org/10.1137/0218082 DO - 10.1137/0218082 ID - Zhang1989 ER - TY - JOUR AU - Demaine, E. D. AU - Mozes, S. AU - Rossman, B. AU - Weimann, O. PY - 2009 DA - 2009// TI - An optimal decomposition algorithm for tree edit distance JO - ACM Trans Algorithms VL - 6 UR - https://doi.org/10.1145/1644015.1644017 DO - 10.1145/1644015.1644017 ID - Demaine2009 ER - TY - STD TI - Pawlik M, Augsten N. RTED : A Robust Algorithm for the Tree Edit Distance. In: The 38th Int Conf on Very Large Data Bases.2011. p. 334–345. ID - ref13 ER - TY - JOUR AU - Cannone, J. J. AU - Subramanian, S. AU - Schnare, M. N. AU - Collett, J. R. AU - D’Souza, L. M. AU - Du, Y. AU - Feng, B. AU - Lin, N. AU - Madabusi, L. V. AU - Müller, K. M. AU - Pande, N. AU - Shang, Z. AU - Yu, N. AU - Gutell, R. R. PY - 2002 DA - 2002// TI - The comparative RNA web (CRW) site: an online database of comparative sequence and structure information for ribosomal, intron, and other RNAs JO - BMC Bioinformatics VL - 3 UR - https://doi.org/10.1186/1471-2105-3-2 DO - 10.1186/1471-2105-3-2 ID - Cannone2002 ER - TY - JOUR AU - Volders, P. J. AU - Verheggen, K. AU - Menschaert, G. AU - Vandepoele, K. AU - Martens, L. AU - Vandesompele, J. AU - Mestdagh, P. PY - 2014 DA - 2014// TI - An update on lncipedia: a database for annotated human lncrna sequences JO - Nucleic Acids Res VL - 43 UR - https://doi.org/10.1093/nar/gku1060 DO - 10.1093/nar/gku1060 ID - Volders2014 ER -