Skip to main content

Table 1 Signatures selected by ADAGE signature analysis for the example dataset and their associated KEGG pathways

From: ADAGE signature analysis: differential expression analysis with data-defined gene sets

  1. The significance of a pathway’s association with a signature and the significance of the pathway’s activity difference between ∆anr mutant and wild-type are provided respectively. Adjusted p-values were rounded off to three decimal digits. A star indicates a significantly active pathway with adjusted p-value < = 0.05. Pathways detected both by ADAGE signature analysis and GSEA (Table 2) are colored correspondingly