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Table 2 Clusters formed by DMRfinder and BiSeq in analyzing the Lister et al. [9] IMR90 samples

From: DMRfinder: efficiently identifying differentially methylated regions from MethylC-seq data

  Number of clusters Total length (Mbp) Average length (bp)
DMRfinder (default) 522,963 46.0 88.0
DMRfinder (−r 1 -m 1 -x 1e9 -c 5) 795,637 168.7 212.1
BiSeq 795,637 168.7 212.1
  1. DMRfinder was run using default parameters and an alternative set of parameters matching BiSeq’s clustering approach