Table 4 Data processing of all gene expression datasets
From: dbMDEGA: a database for meta-analysis of differentially expressed genes in autism spectrum disorder
| Dataset | Chip Type | Data Processing | R Package |
|---|---|---|---|
| Human | |||
| GSE28475 | Illumina | Quantile normalization and log2 transformation | lumi |
| GSE28521 | Illumina | Quantile normalization and log2 transformation | lumi |
| GSE28521 | Illumina | Quantile normalization and log2 transformation | lumi |
| Mouse | |||
| GSE62594 | Agilent | Quantile normalization and log2 transformation | limma |
| GSE51612 | Agilent | Quantile normalization and log2 transformation | limma |
| GSE40630 | Affymetrix | RMA | affy |
| GSE47150 | Affymetrix | RMA | affy |
| GSE32012 | Affymetrix | RMA | affy |