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Table 4 Data processing of all gene expression datasets

From: dbMDEGA: a database for meta-analysis of differentially expressed genes in autism spectrum disorder

Dataset Chip Type Data Processing R Package
Human
 GSE28475 Illumina Quantile normalization and log2 transformation lumi
 GSE28521 Illumina Quantile normalization and log2 transformation lumi
 GSE28521 Illumina Quantile normalization and log2 transformation lumi
Mouse
 GSE62594 Agilent Quantile normalization and log2 transformation limma
 GSE51612 Agilent Quantile normalization and log2 transformation limma
 GSE40630 Affymetrix RMA affy
 GSE47150 Affymetrix RMA affy
 GSE32012 Affymetrix RMA affy