From: Detecting intermediate protein conformations using algebraic topology
PDB | Isomap closest clust. (RMSD) | PCA closest clust. (RMSD) |
---|---|---|
1E4Y | Clust 1 (1.7Å) | Clust 1 (2.1Å) |
1AK2 | Clust 2 (3.5Å) | Clust 1 (4.1Å) |
1DVR | Clust 2 (2.6Å) | Clust 1 (2.8Å) |
2RH5A | Clust 6 (2.2Å) | Clust 3 (2.5Å) |
2RH5B | Clust 6 (2.3Å) | Clust 3 (2.4Å) |
2RH5C | Clust 6 (3.0Å) | Clust 3 (3.1Å) |