Skip to main content

Table 1 Input PPI datasets

From: RocSampler: regularizing overlapping protein complexes in protein-protein interaction networks

 

#Protein

#PPI

Degree

Threshold

WI-PHI

5,953

49,607

16.7

N/A

Collins

1,622

9,074

11.2

top 9,074

Krogan core

2,708

7,123

5.3

0.273

Krogan extended

3,672

14,317

7.8

0.101

Gavin

1,855

7,669

8.3

5

  1. This table shows the number of proteins, the number of PPIs, the average of the degrees of proteins, and the threshold used to filter out unreliable PPIs