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Table 4 Selected parameters for the Collins, Gavin, Krogan core, and Krogan extended PPI datasets

From: RocSampler: regularizing overlapping protein complexes in protein-protein interaction networks

  Collins Gavin Krogan core Krogan extended
MCL 2.1 2.5 2.4 1.6
SPICi 0.1, 0.5, 0 0.4, 0.4, 0 0.6, 0.3, 0 0.6, 0.4, 0
ClusterONE 0.7 0.4 0.6 0.7
NWE 0.4, 0.3, 0.1 0.4, 0.3, 0.2 0.4, 0.3, 0.4 0.4, 0.7, 0.1
PPSampler2 1500, 3, 107, 1000 500, 2.5, 105, 1000 1000, 2, 107, 1000 1500, 3, 107, 1000
RocSampler 90, 0.3 300, 5, 170, 0.2, 200, 20, 170, 0.3, 500, 15, 150, 0.3, 200, 15,
  1.5×10−4 10−4 1.5×10−4 1.5×10−4
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