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Table 1 Comparison of different structural neighborhoods in terms of MCC

From: Utilizing knowledge base of amino acids structural neighborhoods to predict protein-protein interaction sites

Surroundings

c 2

c 4

c 6

c 8

c 12

c 16

c 20

d 1

d 2

MCC

0.090

0.475

0.643

0.670

0.685

0.682

0.674

0.548

0.555

  1. (Fingerprints length: 1023 bits; features type: amino acid type only; one most similar element)
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