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Table 1 Comparison of different structural neighborhoods in terms of MCC

From: Utilizing knowledge base of amino acids structural neighborhoods to predict protein-protein interaction sites

Surroundings c 2 c 4 c 6 c 8 c 12 c 16 c 20 d 1 d 2
MCC 0.090 0.475 0.643 0.670 0.685 0.682 0.674 0.548 0.555
  1. (Fingerprints length: 1023 bits; features type: amino acid type only; one most similar element)
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