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Table 2 Comparison of different features in terms of MCC

From: Utilizing knowledge base of amino acids structural neighborhoods to predict protein-protein interaction sites

  

Central amino acid

 

aa

aa & rasa

rasa

Fingerprint

aa

0.643

0.641

0.620

 

aa & rasa

0.518

0.567

0.535

 

rasa

0.364

0.381

0.337

  1. (Neighborhood: c 6; fingerprints length: 1023 bits; one most similar element)