Fig. 3
From: Fast batch searching for protein homology based on compression and clustering
Illustration of compression process. This is an illustration of compression process. Seq a and seq b are sequences taken from the original sequence set which include the same key ‘SERGK’ with their subsequences similarity being more than 80%. Seq b is compressed by removing the similar counterparts. To keep the completeness of seq b, a script is employed to record the differences between seq a and the compressed seq b, where ‘a, 15, 43’ records the site of the removed segment, ‘r6L, r8A, r3V, i5D’ records the small differences compared with the representative sequence