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Table 4 Results of paired t-test. A paired t-test and 95% confidence interval are calculated in SPSS using the hypothetical data from Table 1 and three other hypothetical plate experiments. The P-value is from a two-tailed test assuming a mean difference of 0

From: A common base method for analysis of qPCR data and the application of simple blocking in qPCR experiments

Biological replicate r

Sample A \( {\Delta C}_{q;r,A}^{(w)} \)

Sample B \( {\Delta C}_{q;r,B}^{(w)} \)

\( {\Delta \Delta C}_{q;r}^{(w)} \)

r = 1

1.1387

1.4077

−0.269

r = 2

0.845

1.291

−0.446

r = 3

0.499

1.496

−0.997

r = 4

0.699

1.172

−0.473

  

Mean \( {\Delta \Delta C}_q^{(w)} \)

−0.546

  

SD for \( {\Delta \Delta C}_q^{(w)} \)

0.314

  

N

4

  

T for \( {\Delta \Delta C}_q^{(w)} \)

−3.48

  

P

0.040

  

95% CI for \( {\Delta \Delta C}_q^{(w)} \)

(−1.046, −0.047)

  

Expression Ratio \( {10}^{-\Delta \Delta {C}_q^{(w)}} \)

3.52

  

95% CI for \( {10}^{-\Delta \Delta {C}_q^{(w)}} \)

(1.11, 11.12)