Fig. 5
From: R3D-BLAST2: an improved search tool for similar RNA 3D substructures
Two RNA substructures and alignments of their SA-encoded sequences: (a) a substructure of an RNA pseudoknot (PDB ID: 2NOQ, chain ID: B and residue range: 516–545), (b) a substructure of an 18S rRNA (PDB ID: 3J81, chain ID: 2 and residue range: 562–591), (c) an alignment with an identity of 30% between their SA-encoded sequences translated by the SA of R3D-BLAST, and (d) an alignment with an identity of 66.7% between their SA-encoded sequences translated by the SA of R3D-BLAST2