Table 2 A benchmark dataset of eight RNA 3D structures
From: R3D-BLAST2: an improved search tool for similar RNA 3D substructures
Query RNA | PDB ID | Chain ID | Length |
|---|---|---|---|
Pseudoknot | 2NOQ | B | 46 |
Riboswitch | 1Y27 | X | 68 |
Ribozyme | 1VBY | B | 73 |
tRNA | 1EHZ | A | 76 |
5S rRNA | 3CC2 | 9 | 122 |
12S rRNA | 5AJ3 | A | 960 |
16S rRNA | 4ADV | A | 1530 |
18S rRNA | 3J80 | 2 | 1797 |