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Table 3 The prediction accuracies of DeepSacon and other machine learning methods in 3-state solvent accessibility and 15-state contact number prediction on the training set and CASP11

From: A sparse autoencoder-based deep neural network for protein solvent accessibility and contact number prediction

 

Training set

CASP11

Method

Q 3

Q 15

Q 3

Q 15

SVM

0.64

0.29

0.61

0.27

NN

0.65

0.28

0.63

0.26

DeepSacon

0.70

0.33

0.68

0.31

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BMC Bioinformatics

ISSN: 1471-2105

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