Table 2 A summary table of three simulation scenarios
From: Super-delta: a new differential gene expression analysis procedure with robust data normalization
| Â | Classical | Â | Super-delta | |||||
|---|---|---|---|---|---|---|---|---|
| Â | Oracle | Global | medIQR | Quantile | Cyclic-loess | Mean | Median | MFTM |
SIM1 | Â | Â | Â | Â | Â | Â | Â | Â |
Power | 88.82(1.02) | 88.17(1.08) | 87.84(0.99) | 87.71(1.00) | 87.61(1.01) | 88.48(1.04) | 88.89(1.13) | 88.85(1.00) |
Type I error | 0.46(0.07) | 0.49(0.08) | 0.50(0.07) | 0.51(0.08) | 0.52(0.07) | 0.44(0.08) | 0.41(0.08) | 0.40(0.07) |
SIM2 | Â | Â | Â | Â | Â | Â | Â | Â |
Power | 92.11(0.81) | 90.94(0.89) | 90.37(0.95) | 90.17(0.93) | 89.94(0.95) | 91.26(1.01) | 91.79(0.94) | 92.09(0.77) |
Type I error | 0.93(0.14) | 1.08(0.17) | 1.25(0.22) | 1.26(0.19) | 1.36(0.23) | 1.03(0.22) | 0.85(0.15) | 0.83(0.15) |
SIM3 | Â | Â | Â | Â | Â | Â | Â | Â |
Power | 89.18(1.49) | 76.67(1.51) | 77.28(1.84) | 76.20(1.63) | 76.51(1.59) | 77.16(1.89) | 86.05(1.70) | 88.55(1.62) |
Type I error | 0.61(0.11) | 1.53(0.19) | 1.42(0.20) | 1.55(0.20) | 1.52(0.20) | 1.46(0.26) | 0.61(0.14) | 0.54(0.12) |